Cluster: HRGMv2_3449_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3449
- CGC Family ID: CGCFAM_00750
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_17 | HRGMv2_3449_17_17 | 16953 | 18602 | + | GH43_34 |
| NULL(UNKNOWN) | HRGMv2_3449_17 | HRGMv2_3449_17_18 | 18612 | 20045 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3449_17 | HRGMv2_3449_17_19 | 20042 | 21937 | + | SBP_bac_8 | SBP_bac_8 |
| TC | HRGMv2_3449_17 | HRGMv2_3449_17_20 | 21949 | 22854 | + | 3.A.1.1.11 |
| TC | HRGMv2_3449_17 | HRGMv2_3449_17_21 | 22841 | 23746 | + | 3.A.1.1.46 |
| TC | HRGMv2_3449_17 | HRGMv2_3449_17_22 | 23759 | 25081 | + | 3.A.1.1.26 |
Gene ID: HRGMv2_3449_17_17
Type: CAZyme
Location: 16953 - 18602 (+)
Type: CAZyme
Location: 16953 - 18602 (+)
Gene ID: HRGMv2_3449_17_18
Type:
Location: 18612 - 20045 (+)
Type:
Location: 18612 - 20045 (+)
Gene ID: HRGMv2_3449_17_19
Type: pfam
Location: 20042 - 21937 (+)
Type: pfam
Location: 20042 - 21937 (+)
Gene ID: HRGMv2_3449_17_20
Type: TC
Location: 21949 - 22854 (+)
Type: TC
Location: 21949 - 22854 (+)
Gene ID: HRGMv2_3449_17_21
Type: TC
Location: 22841 - 23746 (+)
Type: TC
Location: 22841 - 23746 (+)
Gene ID: HRGMv2_3449_17_22
Type: TC
Location: 23759 - 25081 (+)
Type: TC
Location: 23759 - 25081 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.