Cluster: HRGMv2_3449_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3449
- CGC Family ID: CGCFAM_00233
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_14 | HRGMv2_3449_14_33 | 32571 | 38399 | - | GH3 |
| pfam | HRGMv2_3449_14 | HRGMv2_3449_14_34 | 38503 | 39837 | - | HATPase_c_5 |
| TF | HRGMv2_3449_14 | HRGMv2_3449_14_35 | 39837 | 40550 | - | LytTR |
| TC | HRGMv2_3449_14 | HRGMv2_3449_14_36 | 40651 | 41979 | - | 3.A.5.1.1 |
| STP | HRGMv2_3449_14 | HRGMv2_3449_14_37 | 41979 | 42302 | - | Sigma70_r4 |
| NULL(UNKNOWN) | HRGMv2_3449_14 | HRGMv2_3449_14_38 | 42304 | 42552 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3449_14 | HRGMv2_3449_14_39 | 42542 | 43528 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_3449_14_33
Type: CAZyme
Location: 32571 - 38399 (-)
Type: CAZyme
Location: 32571 - 38399 (-)
Gene ID: HRGMv2_3449_14_34
Type: pfam
Location: 38503 - 39837 (-)
Type: pfam
Location: 38503 - 39837 (-)
Gene ID: HRGMv2_3449_14_35
Type: TF
Location: 39837 - 40550 (-)
Type: TF
Location: 39837 - 40550 (-)
Gene ID: HRGMv2_3449_14_36
Type: TC
Location: 40651 - 41979 (-)
Type: TC
Location: 40651 - 41979 (-)
Gene ID: HRGMv2_3449_14_37
Type: STP
Location: 41979 - 42302 (-)
Type: STP
Location: 41979 - 42302 (-)
Gene ID: HRGMv2_3449_14_38
Type:
Location: 42304 - 42552 (-)
Type:
Location: 42304 - 42552 (-)
Gene ID: HRGMv2_3449_14_39
Type: TC
Location: 42542 - 43528 (-)
Type: TC
Location: 42542 - 43528 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3449_14_37 | vegetarian > omnivore | 20.88537 | 0.02973 |