Cluster: HRGMv2_3449_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3449
- CGC Family ID: CGCFAM_06223
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_3 | HRGMv2_3449_3_56 | 57118 | 60183 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_3449_3 | HRGMv2_3449_3_57 | 60185 | 60307 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3449_3 | HRGMv2_3449_3_58 | 60317 | 61723 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3449_3 | HRGMv2_3449_3_59 | 61728 | 64079 | + | GH136 |
| NULL(UNKNOWN) | HRGMv2_3449_3 | HRGMv2_3449_3_60 | 64376 | 64801 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3449_3 | HRGMv2_3449_3_61 | 64811 | 65872 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3449_3 | HRGMv2_3449_3_62 | 65979 | 67751 | + | 3.A.1.106.8 |
| TC | HRGMv2_3449_3 | HRGMv2_3449_3_63 | 67744 | 69543 | + | 3.A.1.106.8 |
| NULL(UNKNOWN) | HRGMv2_3449_3 | HRGMv2_3449_3_64 | 69623 | 70111 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3449_3 | HRGMv2_3449_3_65 | 70108 | 70593 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3449_3 | HRGMv2_3449_3_66 | 70742 | 73192 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_3449_3_56
Type: CAZyme
Location: 57118 - 60183 (+)
Type: CAZyme
Location: 57118 - 60183 (+)
Gene ID: HRGMv2_3449_3_57
Type:
Location: 60185 - 60307 (+)
Type:
Location: 60185 - 60307 (+)
Gene ID: HRGMv2_3449_3_58
Type:
Location: 60317 - 61723 (+)
Type:
Location: 60317 - 61723 (+)
Gene ID: HRGMv2_3449_3_59
Type: CAZyme
Location: 61728 - 64079 (+)
Type: CAZyme
Location: 61728 - 64079 (+)
Gene ID: HRGMv2_3449_3_60
Type:
Location: 64376 - 64801 (+)
Type:
Location: 64376 - 64801 (+)
Gene ID: HRGMv2_3449_3_61
Type:
Location: 64811 - 65872 (+)
Type:
Location: 64811 - 65872 (+)
Gene ID: HRGMv2_3449_3_62
Type: TC
Location: 65979 - 67751 (+)
Type: TC
Location: 65979 - 67751 (+)
Gene ID: HRGMv2_3449_3_63
Type: TC
Location: 67744 - 69543 (+)
Type: TC
Location: 67744 - 69543 (+)
Gene ID: HRGMv2_3449_3_64
Type:
Location: 69623 - 70111 (+)
Type:
Location: 69623 - 70111 (+)
Gene ID: HRGMv2_3449_3_65
Type:
Location: 70108 - 70593 (+)
Type:
Location: 70108 - 70593 (+)
Gene ID: HRGMv2_3449_3_66
Type: TC
Location: 70742 - 73192 (+)
Type: TC
Location: 70742 - 73192 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.