Cluster: HRGMv2_3447_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3447
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3447_4 | HRGMv2_3447_4_30 | 37220 | 37969 | + | 3.A.1.17.1 |
| TC | HRGMv2_3447_4 | HRGMv2_3447_4_31 | 37956 | 38771 | + | 3.A.1.17.6 |
| pfam | HRGMv2_3447_4 | HRGMv2_3447_4_32 | 38846 | 39847 | + | NMT1 | NMT1_2 |
| CAZyme | HRGMv2_3447_4 | HRGMv2_3447_4_33 | 39871 | 41490 | - | GT2 |
Gene ID: HRGMv2_3447_4_30
Type: TC
Location: 37220 - 37969 (+)
Type: TC
Location: 37220 - 37969 (+)
Gene ID: HRGMv2_3447_4_31
Type: TC
Location: 37956 - 38771 (+)
Type: TC
Location: 37956 - 38771 (+)
Gene ID: HRGMv2_3447_4_32
Type: pfam
Location: 38846 - 39847 (+)
Type: pfam
Location: 38846 - 39847 (+)
Gene ID: HRGMv2_3447_4_33
Type: CAZyme
Location: 39871 - 41490 (-)
Type: CAZyme
Location: 39871 - 41490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp934162685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.