Cluster: HRGMv2_3447_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3447
- CGC Family ID: CGCFAM_00750
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3447_3 | HRGMv2_3447_3_85 | 87024 | 88349 | - | 3.A.1.1.26 |
| TC | HRGMv2_3447_3 | HRGMv2_3447_3_86 | 88361 | 89254 | - | 3.A.1.1.46 |
| TC | HRGMv2_3447_3 | HRGMv2_3447_3_87 | 89259 | 90164 | - | 3.A.1.1.11 |
| pfam | HRGMv2_3447_3 | HRGMv2_3447_3_88 | 90176 | 92056 | - | SBP_bac_8 |
| NULL(UNKNOWN) | HRGMv2_3447_3 | HRGMv2_3447_3_89 | 92074 | 93504 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3447_3 | HRGMv2_3447_3_90 | 93514 | 95172 | - | GH43 |
Gene ID: HRGMv2_3447_3_85
Type: TC
Location: 87024 - 88349 (-)
Type: TC
Location: 87024 - 88349 (-)
Gene ID: HRGMv2_3447_3_86
Type: TC
Location: 88361 - 89254 (-)
Type: TC
Location: 88361 - 89254 (-)
Gene ID: HRGMv2_3447_3_87
Type: TC
Location: 89259 - 90164 (-)
Type: TC
Location: 89259 - 90164 (-)
Gene ID: HRGMv2_3447_3_88
Type: pfam
Location: 90176 - 92056 (-)
Type: pfam
Location: 90176 - 92056 (-)
Gene ID: HRGMv2_3447_3_89
Type:
Location: 92074 - 93504 (-)
Type:
Location: 92074 - 93504 (-)
Gene ID: HRGMv2_3447_3_90
Type: CAZyme
Location: 93514 - 95172 (-)
Type: CAZyme
Location: 93514 - 95172 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp934162685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.