Cluster: HRGMv2_3447_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3447
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3447_1 | HRGMv2_3447_1_221 | 243772 | 244743 | + | 9.B.146.1.6 |
| pfam | HRGMv2_3447_1 | HRGMv2_3447_1_222 | 244740 | 245987 | + | Mur_ligase_M |
| TC | HRGMv2_3447_1 | HRGMv2_3447_1_223 | 245977 | 247053 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3447_1 | HRGMv2_3447_1_224 | 247064 | 248089 | + | GT28 |
Gene ID: HRGMv2_3447_1_221
Type: TC
Location: 243772 - 244743 (+)
Type: TC
Location: 243772 - 244743 (+)
Gene ID: HRGMv2_3447_1_222
Type: pfam
Location: 244740 - 245987 (+)
Type: pfam
Location: 244740 - 245987 (+)
Gene ID: HRGMv2_3447_1_223
Type: TC
Location: 245977 - 247053 (+)
Type: TC
Location: 245977 - 247053 (+)
Gene ID: HRGMv2_3447_1_224
Type: CAZyme
Location: 247064 - 248089 (+)
Type: CAZyme
Location: 247064 - 248089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp934162685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.