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Cluster: HRGMv2_3447_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3447_13 HRGMv2_3447_13_21 18434 19558 - GT4
TC HRGMv2_3447_13 HRGMv2_3447_13_22 19551 21014 - 2.A.66.2.16
pfam HRGMv2_3447_13 HRGMv2_3447_13_23 21019 22386 - Wzy_C
CAZyme HRGMv2_3447_13 HRGMv2_3447_13_24 22383 23468 - GT4
CAZyme HRGMv2_3447_13 HRGMv2_3447_13_25 23471 24586 - GT4
TC HRGMv2_3447_13 HRGMv2_3447_13_26 24589 25308 - 9.B.18.1.2
TC HRGMv2_3447_13 HRGMv2_3447_13_27 25484 26245 + 2.A.5.5.2
pfam HRGMv2_3447_13 HRGMv2_3447_13_28 26285 26476 - FeoB_associated
TC HRGMv2_3447_13 HRGMv2_3447_13_29 26493 28724 - 9.A.8.1.6
Gene ID: HRGMv2_3447_13_21
Type: CAZyme
Location: 18434 - 19558 (-)
Gene ID: HRGMv2_3447_13_22
Type: TC
Location: 19551 - 21014 (-)
Gene ID: HRGMv2_3447_13_23
Type: pfam
Location: 21019 - 22386 (-)
Gene ID: HRGMv2_3447_13_24
Type: CAZyme
Location: 22383 - 23468 (-)
Gene ID: HRGMv2_3447_13_25
Type: CAZyme
Location: 23471 - 24586 (-)
Gene ID: HRGMv2_3447_13_26
Type: TC
Location: 24589 - 25308 (-)
Gene ID: HRGMv2_3447_13_27
Type: TC
Location: 25484 - 26245 (+)
Gene ID: HRGMv2_3447_13_28
Type: pfam
Location: 26285 - 26476 (-)
Gene ID: HRGMv2_3447_13_29
Type: TC
Location: 26493 - 28724 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
RUG131
→
Species
RUG131 sp934162685

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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