Cluster: HRGMv2_3447_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3447
- CGC Family ID: CGCFAM_00874
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3447_8 | HRGMv2_3447_8_57 | 82462 | 84192 | + | 3.A.1.1.22 |
| pfam | HRGMv2_3447_8 | HRGMv2_3447_8_58 | 84218 | 85540 | + | RDD |
| TF | HRGMv2_3447_8 | HRGMv2_3447_8_59 | 85530 | 86396 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_3447_8 | HRGMv2_3447_8_60 | 86763 | 87743 | + | 3.A.1.1.10 |
| TC | HRGMv2_3447_8 | HRGMv2_3447_8_61 | 87759 | 88625 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_3447_8 | HRGMv2_3447_8_62 | 88643 | 90376 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3447_8 | HRGMv2_3447_8_63 | 90386 | 92446 | + | GH110 |
| CAZyme | HRGMv2_3447_8 | HRGMv2_3447_8_64 | 92449 | 95481 | + | GH110 |
| pfam | HRGMv2_3447_8 | HRGMv2_3447_8_65 | 95534 | 97702 | + | Big_2 |
| NULL(UNKNOWN) | HRGMv2_3447_8 | HRGMv2_3447_8_66 | 97780 | 99276 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3447_8 | HRGMv2_3447_8_67 | 99266 | 101539 | + | GH78 |
Gene ID: HRGMv2_3447_8_57
Type: TC
Location: 82462 - 84192 (+)
Type: TC
Location: 82462 - 84192 (+)
Gene ID: HRGMv2_3447_8_58
Type: pfam
Location: 84218 - 85540 (+)
Type: pfam
Location: 84218 - 85540 (+)
Gene ID: HRGMv2_3447_8_59
Type: TF
Location: 85530 - 86396 (-)
Type: TF
Location: 85530 - 86396 (-)
Gene ID: HRGMv2_3447_8_60
Type: TC
Location: 86763 - 87743 (+)
Type: TC
Location: 86763 - 87743 (+)
Gene ID: HRGMv2_3447_8_61
Type: TC
Location: 87759 - 88625 (+)
Type: TC
Location: 87759 - 88625 (+)
Gene ID: HRGMv2_3447_8_62
Type:
Location: 88643 - 90376 (+)
Type:
Location: 88643 - 90376 (+)
Gene ID: HRGMv2_3447_8_63
Type: CAZyme
Location: 90386 - 92446 (+)
Type: CAZyme
Location: 90386 - 92446 (+)
Gene ID: HRGMv2_3447_8_64
Type: CAZyme
Location: 92449 - 95481 (+)
Type: CAZyme
Location: 92449 - 95481 (+)
Gene ID: HRGMv2_3447_8_65
Type: pfam
Location: 95534 - 97702 (+)
Type: pfam
Location: 95534 - 97702 (+)
Gene ID: HRGMv2_3447_8_66
Type:
Location: 97780 - 99276 (+)
Type:
Location: 97780 - 99276 (+)
Gene ID: HRGMv2_3447_8_67
Type: CAZyme
Location: 99266 - 101539 (+)
Type: CAZyme
Location: 99266 - 101539 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp934162685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.