Cluster: HRGMv2_3447_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3447
- CGC Family ID: CGCFAM_04384
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3447_8 | HRGMv2_3447_8_27 | 37604 | 38950 | + | 2.A.38.4.3 |
| TC | HRGMv2_3447_8 | HRGMv2_3447_8_28 | 38960 | 39616 | + | 2.A.38.4.6 |
| NULL(UNKNOWN) | HRGMv2_3447_8 | HRGMv2_3447_8_29 | 40159 | 41145 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3447_8 | HRGMv2_3447_8_30 | 41156 | 41611 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3447_8 | HRGMv2_3447_8_31 | 41629 | 44898 | + | GH3 |
Gene ID: HRGMv2_3447_8_27
Type: TC
Location: 37604 - 38950 (+)
Type: TC
Location: 37604 - 38950 (+)
Gene ID: HRGMv2_3447_8_28
Type: TC
Location: 38960 - 39616 (+)
Type: TC
Location: 38960 - 39616 (+)
Gene ID: HRGMv2_3447_8_29
Type:
Location: 40159 - 41145 (+)
Type:
Location: 40159 - 41145 (+)
Gene ID: HRGMv2_3447_8_30
Type:
Location: 41156 - 41611 (+)
Type:
Location: 41156 - 41611 (+)
Gene ID: HRGMv2_3447_8_31
Type: CAZyme
Location: 41629 - 44898 (+)
Type: CAZyme
Location: 41629 - 44898 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp934162685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.