Cluster: HRGMv2_3447_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3447
- CGC Family ID: CGCFAM_00018
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3447_5 | HRGMv2_3447_5_61 | 65927 | 67111 | - | GT4 |
| pfam | HRGMv2_3447_5 | HRGMv2_3447_5_62 | 67111 | 68253 | - | Epimerase_2 |
| pfam | HRGMv2_3447_5 | HRGMv2_3447_5_63 | 68254 | 69366 | - | Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C |
| TC | HRGMv2_3447_5 | HRGMv2_3447_5_64 | 69381 | 70433 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_3447_5 | HRGMv2_3447_5_65 | 70423 | 71442 | - | GT4 |
| CAZyme | HRGMv2_3447_5 | HRGMv2_3447_5_66 | 71473 | 72237 | - | GT2 |
| TC | HRGMv2_3447_5 | HRGMv2_3447_5_67 | 72242 | 72922 | - | 9.B.18.1.3 |
| pfam | HRGMv2_3447_5 | HRGMv2_3447_5_68 | 72939 | 74150 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | HRGMv2_3447_5 | HRGMv2_3447_5_69 | 74213 | 74851 | - | 9.B.18.1.2 |
| TC | HRGMv2_3447_5 | HRGMv2_3447_5_70 | 74851 | 76731 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_3447_5 | HRGMv2_3447_5_71 | 76979 | 79432 | - | GT4 |
Gene ID: HRGMv2_3447_5_61
Type: CAZyme
Location: 65927 - 67111 (-)
Type: CAZyme
Location: 65927 - 67111 (-)
Gene ID: HRGMv2_3447_5_62
Type: pfam
Location: 67111 - 68253 (-)
Type: pfam
Location: 67111 - 68253 (-)
Gene ID: HRGMv2_3447_5_63
Type: pfam
Location: 68254 - 69366 (-)
Type: pfam
Location: 68254 - 69366 (-)
Gene ID: HRGMv2_3447_5_64
Type: TC
Location: 69381 - 70433 (-)
Type: TC
Location: 69381 - 70433 (-)
Gene ID: HRGMv2_3447_5_65
Type: CAZyme
Location: 70423 - 71442 (-)
Type: CAZyme
Location: 70423 - 71442 (-)
Gene ID: HRGMv2_3447_5_66
Type: CAZyme
Location: 71473 - 72237 (-)
Type: CAZyme
Location: 71473 - 72237 (-)
Gene ID: HRGMv2_3447_5_67
Type: TC
Location: 72242 - 72922 (-)
Type: TC
Location: 72242 - 72922 (-)
Gene ID: HRGMv2_3447_5_68
Type: pfam
Location: 72939 - 74150 (-)
Type: pfam
Location: 72939 - 74150 (-)
Gene ID: HRGMv2_3447_5_69
Type: TC
Location: 74213 - 74851 (-)
Type: TC
Location: 74213 - 74851 (-)
Gene ID: HRGMv2_3447_5_70
Type: TC
Location: 74851 - 76731 (-)
Type: TC
Location: 74851 - 76731 (-)
Gene ID: HRGMv2_3447_5_71
Type: CAZyme
Location: 76979 - 79432 (-)
Type: CAZyme
Location: 76979 - 79432 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp934162685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.