Cluster: HRGMv2_3435_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3435
- CGC Family ID: CGCFAM_00708
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3435_34 | HRGMv2_3435_34_2 | 1982 | 4156 | - | GT2 |
| CAZyme | HRGMv2_3435_34 | HRGMv2_3435_34_3 | 4159 | 6069 | - | GT2 | GT2 |
| pfam | HRGMv2_3435_34 | HRGMv2_3435_34_4 | 6069 | 6938 | - | Glycos_transf_2 |
| TC | HRGMv2_3435_34 | HRGMv2_3435_34_5 | 6940 | 7707 | - | 3.A.1.103.4 |
| TC | HRGMv2_3435_34 | HRGMv2_3435_34_6 | 7719 | 8486 | - | 3.A.1.103.4 |
| pfam | HRGMv2_3435_34 | HRGMv2_3435_34_7 | 8564 | 9436 | - | NTP_transferase | NTP_transf_3 |
| CAZyme | HRGMv2_3435_34 | HRGMv2_3435_34_8 | 9495 | 10337 | - | GT2 |
Gene ID: HRGMv2_3435_34_2
Type: CAZyme
Location: 1982 - 4156 (-)
Type: CAZyme
Location: 1982 - 4156 (-)
Gene ID: HRGMv2_3435_34_3
Type: CAZyme
Location: 4159 - 6069 (-)
Type: CAZyme
Location: 4159 - 6069 (-)
Gene ID: HRGMv2_3435_34_4
Type: pfam
Location: 6069 - 6938 (-)
Type: pfam
Location: 6069 - 6938 (-)
Gene ID: HRGMv2_3435_34_5
Type: TC
Location: 6940 - 7707 (-)
Type: TC
Location: 6940 - 7707 (-)
Gene ID: HRGMv2_3435_34_6
Type: TC
Location: 7719 - 8486 (-)
Type: TC
Location: 7719 - 8486 (-)
Gene ID: HRGMv2_3435_34_7
Type: pfam
Location: 8564 - 9436 (-)
Type: pfam
Location: 8564 - 9436 (-)
Gene ID: HRGMv2_3435_34_8
Type: CAZyme
Location: 9495 - 10337 (-)
Type: CAZyme
Location: 9495 - 10337 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Faecenecus
Species
Faecenecus sp944358775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.