Cluster: HRGMv2_3429_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3429
- CGC Family ID: CGCFAM_01435
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3429_7 | HRGMv2_3429_7_40 | 40043 | 42100 | - | 3.A.1.134.12 |
| TC | HRGMv2_3429_7 | HRGMv2_3429_7_41 | 42087 | 42854 | - | 3.A.1.134.12 |
| STP | HRGMv2_3429_7 | HRGMv2_3429_7_42 | 42922 | 43941 | - | HATPase_c |
| TF | HRGMv2_3429_7 | HRGMv2_3429_7_43 | 43938 | 44600 | - | Trans_reg_C |
| CAZyme | HRGMv2_3429_7 | HRGMv2_3429_7_44 | 44710 | 45798 | + | GT2 |
| TC | HRGMv2_3429_7 | HRGMv2_3429_7_45 | 45862 | 46608 | + | 3.A.1.17.13 |
| TC | HRGMv2_3429_7 | HRGMv2_3429_7_46 | 46601 | 47392 | + | 3.A.1.17.6 |
Gene ID: HRGMv2_3429_7_40
Type: TC
Location: 40043 - 42100 (-)
Type: TC
Location: 40043 - 42100 (-)
Gene ID: HRGMv2_3429_7_41
Type: TC
Location: 42087 - 42854 (-)
Type: TC
Location: 42087 - 42854 (-)
Gene ID: HRGMv2_3429_7_42
Type: STP
Location: 42922 - 43941 (-)
Type: STP
Location: 42922 - 43941 (-)
Gene ID: HRGMv2_3429_7_43
Type: TF
Location: 43938 - 44600 (-)
Type: TF
Location: 43938 - 44600 (-)
Gene ID: HRGMv2_3429_7_44
Type: CAZyme
Location: 44710 - 45798 (+)
Type: CAZyme
Location: 44710 - 45798 (+)
Gene ID: HRGMv2_3429_7_45
Type: TC
Location: 45862 - 46608 (+)
Type: TC
Location: 45862 - 46608 (+)
Gene ID: HRGMv2_3429_7_46
Type: TC
Location: 46601 - 47392 (+)
Type: TC
Location: 46601 - 47392 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1613
Species
UMGS1613 sp900553395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.