Cluster: HRGMv2_3429_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3429
- CGC Family ID: CGCFAM_00060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3429_1 | HRGMv2_3429_1_150 | 151726 | 152856 | + | GT4 |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_151 | 152840 | 154924 | + | Wzy_C | LicD |
| NULL(UNKNOWN) | HRGMv2_3429_1 | HRGMv2_3429_1_152 | 154933 | 155511 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3429_1 | HRGMv2_3429_1_153 | 155524 | 157803 | + | 3.A.1.123.1 |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_154 | 157808 | 158815 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_155 | 159075 | 159422 | + | N_methyl |
| TC | HRGMv2_3429_1 | HRGMv2_3429_1_156 | 159465 | 159905 | + | 9.A.11.1.1 |
| TC | HRGMv2_3429_1 | HRGMv2_3429_1_157 | 159907 | 160896 | + | 9.A.11.1.1 |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_158 | 160893 | 161243 | + | SpoVAC_SpoVAEB |
| NULL(UNKNOWN) | HRGMv2_3429_1 | HRGMv2_3429_1_159 | 161293 | 161436 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3429_1 | HRGMv2_3429_1_160 | 161540 | 164173 | + | 4.A.2.1.17 |
Gene ID: HRGMv2_3429_1_150
Type: CAZyme
Location: 151726 - 152856 (+)
Type: CAZyme
Location: 151726 - 152856 (+)
Gene ID: HRGMv2_3429_1_151
Type: pfam
Location: 152840 - 154924 (+)
Type: pfam
Location: 152840 - 154924 (+)
Gene ID: HRGMv2_3429_1_152
Type:
Location: 154933 - 155511 (+)
Type:
Location: 154933 - 155511 (+)
Gene ID: HRGMv2_3429_1_153
Type: TC
Location: 155524 - 157803 (+)
Type: TC
Location: 155524 - 157803 (+)
Gene ID: HRGMv2_3429_1_154
Type: pfam
Location: 157808 - 158815 (+)
Type: pfam
Location: 157808 - 158815 (+)
Gene ID: HRGMv2_3429_1_155
Type: pfam
Location: 159075 - 159422 (+)
Type: pfam
Location: 159075 - 159422 (+)
Gene ID: HRGMv2_3429_1_156
Type: TC
Location: 159465 - 159905 (+)
Type: TC
Location: 159465 - 159905 (+)
Gene ID: HRGMv2_3429_1_157
Type: TC
Location: 159907 - 160896 (+)
Type: TC
Location: 159907 - 160896 (+)
Gene ID: HRGMv2_3429_1_158
Type: pfam
Location: 160893 - 161243 (+)
Type: pfam
Location: 160893 - 161243 (+)
Gene ID: HRGMv2_3429_1_159
Type:
Location: 161293 - 161436 (+)
Type:
Location: 161293 - 161436 (+)
Gene ID: HRGMv2_3429_1_160
Type: TC
Location: 161540 - 164173 (+)
Type: TC
Location: 161540 - 164173 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1613
Species
UMGS1613 sp900553395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.