Cluster: HRGMv2_3429_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3429
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3429_1 | HRGMv2_3429_1_119 | 115906 | 116955 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_3429_1 | HRGMv2_3429_1_120 | 116945 | 117418 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3429_1 | HRGMv2_3429_1_121 | 117430 | 118050 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3429_1 | HRGMv2_3429_1_122 | 118186 | 119232 | + | 9.B.146.1.4 |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_123 | 119229 | 119984 | + | CTP_transf_like |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_124 | 120027 | 122615 | + | Polysacc_synt | Glyphos_transf | Polysacc_synt_3 |
| CAZyme | HRGMv2_3429_1 | HRGMv2_3429_1_125 | 122625 | 123578 | + | GT2 |
| CAZyme | HRGMv2_3429_1 | HRGMv2_3429_1_126 | 123571 | 124746 | + | GT4 |
| CAZyme | HRGMv2_3429_1 | HRGMv2_3429_1_127 | 124759 | 127257 | + | GT2 |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_128 | 127268 | 128719 | + | DUF6056 |
| pfam | HRGMv2_3429_1 | HRGMv2_3429_1_129 | 128716 | 130203 | + | DUF6056 |
| CAZyme | HRGMv2_3429_1 | HRGMv2_3429_1_130 | 130200 | 131132 | + | GT2 |
Gene ID: HRGMv2_3429_1_119
Type: CAZyme
Location: 115906 - 116955 (+)
Type: CAZyme
Location: 115906 - 116955 (+)
Gene ID: HRGMv2_3429_1_120
Type:
Location: 116945 - 117418 (+)
Type:
Location: 116945 - 117418 (+)
Gene ID: HRGMv2_3429_1_121
Type:
Location: 117430 - 118050 (-)
Type:
Location: 117430 - 118050 (-)
Gene ID: HRGMv2_3429_1_122
Type: TC
Location: 118186 - 119232 (+)
Type: TC
Location: 118186 - 119232 (+)
Gene ID: HRGMv2_3429_1_123
Type: pfam
Location: 119229 - 119984 (+)
Type: pfam
Location: 119229 - 119984 (+)
Gene ID: HRGMv2_3429_1_124
Type: pfam
Location: 120027 - 122615 (+)
Type: pfam
Location: 120027 - 122615 (+)
Gene ID: HRGMv2_3429_1_125
Type: CAZyme
Location: 122625 - 123578 (+)
Type: CAZyme
Location: 122625 - 123578 (+)
Gene ID: HRGMv2_3429_1_126
Type: CAZyme
Location: 123571 - 124746 (+)
Type: CAZyme
Location: 123571 - 124746 (+)
Gene ID: HRGMv2_3429_1_127
Type: CAZyme
Location: 124759 - 127257 (+)
Type: CAZyme
Location: 124759 - 127257 (+)
Gene ID: HRGMv2_3429_1_128
Type: pfam
Location: 127268 - 128719 (+)
Type: pfam
Location: 127268 - 128719 (+)
Gene ID: HRGMv2_3429_1_129
Type: pfam
Location: 128716 - 130203 (+)
Type: pfam
Location: 128716 - 130203 (+)
Gene ID: HRGMv2_3429_1_130
Type: CAZyme
Location: 130200 - 131132 (+)
Type: CAZyme
Location: 130200 - 131132 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1613
Species
UMGS1613 sp900553395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.