Cluster: HRGMv2_3412_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3412_6 | HRGMv2_3412_6_39 | 44140 | 46503 | - | GH31_15 |
| CAZyme | HRGMv2_3412_6 | HRGMv2_3412_6_40 | 46628 | 47638 | - | GT4 |
| pfam | HRGMv2_3412_6 | HRGMv2_3412_6_41 | 47648 | 48706 | - | AI-2E_transport |
| pfam | HRGMv2_3412_6 | HRGMv2_3412_6_42 | 48693 | 49151 | - | Tyr_Deacylase |
| TC | HRGMv2_3412_6 | HRGMv2_3412_6_43 | 49253 | 50401 | + | 2.A.103.1.3 |
Gene ID: HRGMv2_3412_6_39
Type: CAZyme
Location: 44140 - 46503 (-)
Type: CAZyme
Location: 44140 - 46503 (-)
Gene ID: HRGMv2_3412_6_40
Type: CAZyme
Location: 46628 - 47638 (-)
Type: CAZyme
Location: 46628 - 47638 (-)
Gene ID: HRGMv2_3412_6_41
Type: pfam
Location: 47648 - 48706 (-)
Type: pfam
Location: 47648 - 48706 (-)
Gene ID: HRGMv2_3412_6_42
Type: pfam
Location: 48693 - 49151 (-)
Type: pfam
Location: 48693 - 49151 (-)
Gene ID: HRGMv2_3412_6_43
Type: TC
Location: 49253 - 50401 (+)
Type: TC
Location: 49253 - 50401 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
RUG11198
Species
RUG11198 sp934149245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.