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Cluster: HRGMv2_3412_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3412_3 HRGMv2_3412_3_62 63553 64287 + 3.A.1.103.4
TC HRGMv2_3412_3 HRGMv2_3412_3_63 64302 65075 + 3.A.1.103.4
CAZyme HRGMv2_3412_3 HRGMv2_3412_3_64 65329 67497 + GT2 | GT2
pfam HRGMv2_3412_3 HRGMv2_3412_3_65 67502 69853 + GtrA_DPMS_TM | DUF2142
CAZyme HRGMv2_3412_3 HRGMv2_3412_3_66 69910 70626 + GT2
pfam HRGMv2_3412_3 HRGMv2_3412_3_67 70623 70964 + DUF2304
pfam HRGMv2_3412_3 HRGMv2_3412_3_68 70957 72381 + Polysacc_synt | Polysacc_synt_3
CAZyme HRGMv2_3412_3 HRGMv2_3412_3_69 72371 73327 + GT11
CAZyme HRGMv2_3412_3 HRGMv2_3412_3_70 73337 74314 + GT2
CAZyme HRGMv2_3412_3 HRGMv2_3412_3_71 74430 75383 + GT2
Gene ID: HRGMv2_3412_3_62
Type: TC
Location: 63553 - 64287 (+)
Gene ID: HRGMv2_3412_3_63
Type: TC
Location: 64302 - 65075 (+)
Gene ID: HRGMv2_3412_3_64
Type: CAZyme
Location: 65329 - 67497 (+)
Gene ID: HRGMv2_3412_3_65
Type: pfam
Location: 67502 - 69853 (+)
Gene ID: HRGMv2_3412_3_66
Type: CAZyme
Location: 69910 - 70626 (+)
Gene ID: HRGMv2_3412_3_67
Type: pfam
Location: 70623 - 70964 (+)
Gene ID: HRGMv2_3412_3_68
Type: pfam
Location: 70957 - 72381 (+)
Gene ID: HRGMv2_3412_3_69
Type: CAZyme
Location: 72371 - 73327 (+)
Gene ID: HRGMv2_3412_3_70
Type: CAZyme
Location: 73337 - 74314 (+)
Gene ID: HRGMv2_3412_3_71
Type: CAZyme
Location: 74430 - 75383 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
RUG11198
→
Species
RUG11198 sp934149245

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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