Cluster: HRGMv2_3412_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3412_3 | HRGMv2_3412_3_38 | 39469 | 41505 | + | 3.A.7.7.1 |
| NULL(UNKNOWN) | HRGMv2_3412_3 | HRGMv2_3412_3_39 | 41567 | 41953 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3412_3 | HRGMv2_3412_3_40 | 41966 | 43951 | + | Hexapep | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_3412_3 | HRGMv2_3412_3_41 | 44017 | 46539 | - | CBM13 | CBM13 | CBM13 | GH25 |
Gene ID: HRGMv2_3412_3_38
Type: TC
Location: 39469 - 41505 (+)
Type: TC
Location: 39469 - 41505 (+)
Gene ID: HRGMv2_3412_3_39
Type:
Location: 41567 - 41953 (+)
Type:
Location: 41567 - 41953 (+)
Gene ID: HRGMv2_3412_3_40
Type: pfam
Location: 41966 - 43951 (+)
Type: pfam
Location: 41966 - 43951 (+)
Gene ID: HRGMv2_3412_3_41
Type: CAZyme
Location: 44017 - 46539 (-)
Type: CAZyme
Location: 44017 - 46539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
RUG11198
Species
RUG11198 sp934149245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.