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Cluster: HRGMv2_3410_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3410_21 HRGMv2_3410_21_1 317 1111 + CE3
pfam HRGMv2_3410_21 HRGMv2_3410_21_2 1153 1605 + GtrA_DPMS_TM
CAZyme HRGMv2_3410_21 HRGMv2_3410_21_3 1615 2553 + GT2
CAZyme HRGMv2_3410_21 HRGMv2_3410_21_4 2586 4907 + GT4
CAZyme HRGMv2_3410_21 HRGMv2_3410_21_5 4907 5824 + GT2
CAZyme HRGMv2_3410_21 HRGMv2_3410_21_6 5827 6777 + GT2
pfam HRGMv2_3410_21 HRGMv2_3410_21_7 6863 7654 + ABC2_membrane
TC HRGMv2_3410_21 HRGMv2_3410_21_8 7669 8460 + 3.A.1.103.1
CAZyme HRGMv2_3410_21 HRGMv2_3410_21_9 8488 11067 + GT2
Gene ID: HRGMv2_3410_21_1
Type: CAZyme
Location: 317 - 1111 (+)
Gene ID: HRGMv2_3410_21_2
Type: pfam
Location: 1153 - 1605 (+)
Gene ID: HRGMv2_3410_21_3
Type: CAZyme
Location: 1615 - 2553 (+)
Gene ID: HRGMv2_3410_21_4
Type: CAZyme
Location: 2586 - 4907 (+)
Gene ID: HRGMv2_3410_21_5
Type: CAZyme
Location: 4907 - 5824 (+)
Gene ID: HRGMv2_3410_21_6
Type: CAZyme
Location: 5827 - 6777 (+)
Gene ID: HRGMv2_3410_21_7
Type: pfam
Location: 6863 - 7654 (+)
Gene ID: HRGMv2_3410_21_8
Type: TC
Location: 7669 - 8460 (+)
Gene ID: HRGMv2_3410_21_9
Type: CAZyme
Location: 8488 - 11067 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Onthousia
→
Species
Onthousia sp900760545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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