Cluster: HRGMv2_3406_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3406
- CGC Family ID: CGCFAM_10368
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3406_26 | HRGMv2_3406_26_10 | 9974 | 11038 | - | GH25 |
| TC | HRGMv2_3406_26 | HRGMv2_3406_26_11 | 11787 | 12704 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_3406_26 | HRGMv2_3406_26_12 | 12715 | 12909 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_3406_26 | HRGMv2_3406_26_13 | 12893 | 13207 | - | HTH_11 |
| TC | HRGMv2_3406_26 | HRGMv2_3406_26_14 | 13217 | 14185 | - | 3.A.5.1.1 |
| pfam | HRGMv2_3406_26 | HRGMv2_3406_26_15 | 14306 | 15370 | - | RecA | ATPase | Rad51 | AAA_24 | RecA_C |
| TC | HRGMv2_3406_26 | HRGMv2_3406_26_16 | 15546 | 16496 | - | 2.A.19.5.2 |
Gene ID: HRGMv2_3406_26_10
Type: CAZyme
Location: 9974 - 11038 (-)
Type: CAZyme
Location: 9974 - 11038 (-)
Gene ID: HRGMv2_3406_26_11
Type: TC
Location: 11787 - 12704 (-)
Type: TC
Location: 11787 - 12704 (-)
Gene ID: HRGMv2_3406_26_12
Type:
Location: 12715 - 12909 (-)
Type:
Location: 12715 - 12909 (-)
Gene ID: HRGMv2_3406_26_13
Type: TF
Location: 12893 - 13207 (-)
Type: TF
Location: 12893 - 13207 (-)
Gene ID: HRGMv2_3406_26_14
Type: TC
Location: 13217 - 14185 (-)
Type: TC
Location: 13217 - 14185 (-)
Gene ID: HRGMv2_3406_26_15
Type: pfam
Location: 14306 - 15370 (-)
Type: pfam
Location: 14306 - 15370 (-)
Gene ID: HRGMv2_3406_26_16
Type: TC
Location: 15546 - 16496 (-)
Type: TC
Location: 15546 - 16496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
RUG11198
Species
RUG11198 sp934176955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.