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Cluster: HRGMv2_3406_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3406_11 HRGMv2_3406_11_13 12775 13455 + 8.A.3.1.2
TC HRGMv2_3406_11 HRGMv2_3406_11_14 13455 14861 + 9.B.18.1.2
CAZyme HRGMv2_3406_11 HRGMv2_3406_11_15 14905 16017 + GT4
CAZyme HRGMv2_3406_11 HRGMv2_3406_11_16 16025 17149 + GT4
CAZyme HRGMv2_3406_11 HRGMv2_3406_11_17 17146 18024 + GT2
CAZyme HRGMv2_3406_11 HRGMv2_3406_11_18 18031 19227 + GT4
pfam HRGMv2_3406_11 HRGMv2_3406_11_19 19205 20380 + Wzy_C
CAZyme HRGMv2_3406_11 HRGMv2_3406_11_20 20364 21374 + GT2
pfam HRGMv2_3406_11 HRGMv2_3406_11_21 21371 21910 + Hexapep | Hexapep_2
TC HRGMv2_3406_11 HRGMv2_3406_11_22 22007 24109 + 2.A.66.1.40
Gene ID: HRGMv2_3406_11_13
Type: TC
Location: 12775 - 13455 (+)
Gene ID: HRGMv2_3406_11_14
Type: TC
Location: 13455 - 14861 (+)
Gene ID: HRGMv2_3406_11_15
Type: CAZyme
Location: 14905 - 16017 (+)
Gene ID: HRGMv2_3406_11_16
Type: CAZyme
Location: 16025 - 17149 (+)
Gene ID: HRGMv2_3406_11_17
Type: CAZyme
Location: 17146 - 18024 (+)
Gene ID: HRGMv2_3406_11_18
Type: CAZyme
Location: 18031 - 19227 (+)
Gene ID: HRGMv2_3406_11_19
Type: pfam
Location: 19205 - 20380 (+)
Gene ID: HRGMv2_3406_11_20
Type: CAZyme
Location: 20364 - 21374 (+)
Gene ID: HRGMv2_3406_11_21
Type: pfam
Location: 21371 - 21910 (+)
Gene ID: HRGMv2_3406_11_22
Type: TC
Location: 22007 - 24109 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
RUG11198
→
Species
RUG11198 sp934176955

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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