Cluster: HRGMv2_3399_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3399
- CGC Family ID: CGCFAM_06222
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3399_3 | HRGMv2_3399_3_6 | 5344 | 7389 | - | 3.A.11.1.1 |
| TC | HRGMv2_3399_3 | HRGMv2_3399_3_7 | 7358 | 8071 | - | 3.A.11.1.4 |
| STP | HRGMv2_3399_3 | HRGMv2_3399_3_8 | 8350 | 9111 | - | Response_reg | Spo0A_C |
| pfam | HRGMv2_3399_3 | HRGMv2_3399_3_9 | 9241 | 9963 | - | TIM |
| CAZyme | HRGMv2_3399_3 | HRGMv2_3399_3_10 | 9956 | 11185 | - | GT4 |
Gene ID: HRGMv2_3399_3_6
Type: TC
Location: 5344 - 7389 (-)
Type: TC
Location: 5344 - 7389 (-)
Gene ID: HRGMv2_3399_3_7
Type: TC
Location: 7358 - 8071 (-)
Type: TC
Location: 7358 - 8071 (-)
Gene ID: HRGMv2_3399_3_8
Type: STP
Location: 8350 - 9111 (-)
Type: STP
Location: 8350 - 9111 (-)
Gene ID: HRGMv2_3399_3_9
Type: pfam
Location: 9241 - 9963 (-)
Type: pfam
Location: 9241 - 9963 (-)
Gene ID: HRGMv2_3399_3_10
Type: CAZyme
Location: 9956 - 11185 (-)
Type: CAZyme
Location: 9956 - 11185 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-762
Species
CAG-762 sp000432575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.