Cluster: HRGMv2_3399_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3399
- CGC Family ID: CGCFAM_00055
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3399_1 | HRGMv2_3399_1_230 | 222520 | 223221 | + | GT26 |
| pfam | HRGMv2_3399_1 | HRGMv2_3399_1_231 | 223218 | 224018 | + | ABC2_membrane |
| TC | HRGMv2_3399_1 | HRGMv2_3399_1_232 | 224030 | 224785 | + | 3.A.1.103.5 |
Gene ID: HRGMv2_3399_1_230
Type: CAZyme
Location: 222520 - 223221 (+)
Type: CAZyme
Location: 222520 - 223221 (+)
Gene ID: HRGMv2_3399_1_231
Type: pfam
Location: 223218 - 224018 (+)
Type: pfam
Location: 223218 - 224018 (+)
Gene ID: HRGMv2_3399_1_232
Type: TC
Location: 224030 - 224785 (+)
Type: TC
Location: 224030 - 224785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-762
Species
CAG-762 sp000432575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.