Cluster: HRGMv2_3392_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3392
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3392_6 | HRGMv2_3392_6_7 | 8475 | 9557 | - | GT2 |
| pfam | HRGMv2_3392_6 | HRGMv2_3392_6_8 | 9565 | 10332 | - | Collagen |
| TC | HRGMv2_3392_6 | HRGMv2_3392_6_9 | 10389 | 11162 | - | 3.A.1.17.3 |
| TC | HRGMv2_3392_6 | HRGMv2_3392_6_10 | 11162 | 11911 | - | 3.A.1.17.13 |
Gene ID: HRGMv2_3392_6_7
Type: CAZyme
Location: 8475 - 9557 (-)
Type: CAZyme
Location: 8475 - 9557 (-)
Gene ID: HRGMv2_3392_6_8
Type: pfam
Location: 9565 - 10332 (-)
Type: pfam
Location: 9565 - 10332 (-)
Gene ID: HRGMv2_3392_6_9
Type: TC
Location: 10389 - 11162 (-)
Type: TC
Location: 10389 - 11162 (-)
Gene ID: HRGMv2_3392_6_10
Type: TC
Location: 11162 - 11911 (-)
Type: TC
Location: 11162 - 11911 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-1000
Species
CAG-1000 sp000436975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.