Cluster: HRGMv2_3392_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3392
- CGC Family ID: CGCFAM_01985
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3392_3 | HRGMv2_3392_3_71 | 74523 | 76643 | - | GT51 |
| pfam | HRGMv2_3392_3 | HRGMv2_3392_3_72 | 76782 | 77717 | + | DAGK_cat | YegS_C |
| TC | HRGMv2_3392_3 | HRGMv2_3392_3_73 | 77792 | 78748 | + | 2.A.19.5.2 |
| NULL(UNKNOWN) | HRGMv2_3392_3 | HRGMv2_3392_3_74 | 78805 | 79665 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3392_3 | HRGMv2_3392_3_75 | 79643 | 81364 | + | 4.C.1.1.7 |
Gene ID: HRGMv2_3392_3_71
Type: CAZyme
Location: 74523 - 76643 (-)
Type: CAZyme
Location: 74523 - 76643 (-)
Gene ID: HRGMv2_3392_3_72
Type: pfam
Location: 76782 - 77717 (+)
Type: pfam
Location: 76782 - 77717 (+)
Gene ID: HRGMv2_3392_3_73
Type: TC
Location: 77792 - 78748 (+)
Type: TC
Location: 77792 - 78748 (+)
Gene ID: HRGMv2_3392_3_74
Type:
Location: 78805 - 79665 (+)
Type:
Location: 78805 - 79665 (+)
Gene ID: HRGMv2_3392_3_75
Type: TC
Location: 79643 - 81364 (+)
Type: TC
Location: 79643 - 81364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-1000
Species
CAG-1000 sp000436975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.