Cluster: HRGMv2_3391_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3391
- CGC Family ID: CGCFAM_01522
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3391_9 | HRGMv2_3391_9_25 | 25193 | 25867 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3391_9 | HRGMv2_3391_9_26 | 25915 | 26688 | + | GT111 |
| CAZyme | HRGMv2_3391_9 | HRGMv2_3391_9_27 | 26672 | 27823 | + | GT4 |
| pfam | HRGMv2_3391_9 | HRGMv2_3391_9_28 | 27798 | 28970 | + | Glyphos_transf |
| pfam | HRGMv2_3391_9 | HRGMv2_3391_9_29 | 28983 | 30140 | + | Wzy_C |
| CAZyme | HRGMv2_3391_9 | HRGMv2_3391_9_30 | 30130 | 31125 | + | GT2 |
| TC | HRGMv2_3391_9 | HRGMv2_3391_9_31 | 31133 | 32665 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_3391_9_25
Type: TC
Location: 25193 - 25867 (+)
Type: TC
Location: 25193 - 25867 (+)
Gene ID: HRGMv2_3391_9_26
Type: CAZyme
Location: 25915 - 26688 (+)
Type: CAZyme
Location: 25915 - 26688 (+)
Gene ID: HRGMv2_3391_9_27
Type: CAZyme
Location: 26672 - 27823 (+)
Type: CAZyme
Location: 26672 - 27823 (+)
Gene ID: HRGMv2_3391_9_28
Type: pfam
Location: 27798 - 28970 (+)
Type: pfam
Location: 27798 - 28970 (+)
Gene ID: HRGMv2_3391_9_29
Type: pfam
Location: 28983 - 30140 (+)
Type: pfam
Location: 28983 - 30140 (+)
Gene ID: HRGMv2_3391_9_30
Type: CAZyme
Location: 30130 - 31125 (+)
Type: CAZyme
Location: 30130 - 31125 (+)
Gene ID: HRGMv2_3391_9_31
Type: TC
Location: 31133 - 32665 (+)
Type: TC
Location: 31133 - 32665 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-582
Species
CAG-582 sp900760845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.