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Cluster: HRGMv2_3391_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3391_7 HRGMv2_3391_7_27 25878 26612 + 3.A.1.103.4
TC HRGMv2_3391_7 HRGMv2_3391_7_28 26623 27402 + 3.A.1.103.4
pfam HRGMv2_3391_7 HRGMv2_3391_7_29 27402 28232 + Glycos_transf_2
CAZyme HRGMv2_3391_7 HRGMv2_3391_7_30 28244 30409 + GT4 | GT4
pfam HRGMv2_3391_7 HRGMv2_3391_7_31 30399 31946 + DUF2142
pfam HRGMv2_3391_7 HRGMv2_3391_7_32 32013 34094 + DUF2142
CAZyme HRGMv2_3391_7 HRGMv2_3391_7_33 34115 34840 + GT2
pfam HRGMv2_3391_7 HRGMv2_3391_7_34 34837 35172 + DUF2304
CAZyme HRGMv2_3391_7 HRGMv2_3391_7_35 35159 36310 + GT4
CAZyme HRGMv2_3391_7 HRGMv2_3391_7_36 36297 37358 + GH109
Gene ID: HRGMv2_3391_7_27
Type: TC
Location: 25878 - 26612 (+)
Gene ID: HRGMv2_3391_7_28
Type: TC
Location: 26623 - 27402 (+)
Gene ID: HRGMv2_3391_7_29
Type: pfam
Location: 27402 - 28232 (+)
Gene ID: HRGMv2_3391_7_30
Type: CAZyme
Location: 28244 - 30409 (+)
Gene ID: HRGMv2_3391_7_31
Type: pfam
Location: 30399 - 31946 (+)
Gene ID: HRGMv2_3391_7_32
Type: pfam
Location: 32013 - 34094 (+)
Gene ID: HRGMv2_3391_7_33
Type: CAZyme
Location: 34115 - 34840 (+)
Gene ID: HRGMv2_3391_7_34
Type: pfam
Location: 34837 - 35172 (+)
Gene ID: HRGMv2_3391_7_35
Type: CAZyme
Location: 35159 - 36310 (+)
Gene ID: HRGMv2_3391_7_36
Type: CAZyme
Location: 36297 - 37358 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
CAG-582
→
Species
CAG-582 sp900760845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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