Cluster: HRGMv2_3391_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3391
- CGC Family ID: CGCFAM_05069
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3391_4 | HRGMv2_3391_4_28 | 23384 | 24583 | - | GH25 |
| pfam | HRGMv2_3391_4 | HRGMv2_3391_4_29 | 24660 | 25202 | + | CpXC |
| TC | HRGMv2_3391_4 | HRGMv2_3391_4_30 | 25199 | 27061 | + | 3.A.1.121.4 |
| pfam | HRGMv2_3391_4 | HRGMv2_3391_4_31 | 27075 | 27332 | - | Coat_F |
| NULL(UNKNOWN) | HRGMv2_3391_4 | HRGMv2_3391_4_32 | 27326 | 27511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3391_4 | HRGMv2_3391_4_33 | 27593 | 28450 | + | 2.A.4.7.6 |
Gene ID: HRGMv2_3391_4_28
Type: CAZyme
Location: 23384 - 24583 (-)
Type: CAZyme
Location: 23384 - 24583 (-)
Gene ID: HRGMv2_3391_4_29
Type: pfam
Location: 24660 - 25202 (+)
Type: pfam
Location: 24660 - 25202 (+)
Gene ID: HRGMv2_3391_4_30
Type: TC
Location: 25199 - 27061 (+)
Type: TC
Location: 25199 - 27061 (+)
Gene ID: HRGMv2_3391_4_31
Type: pfam
Location: 27075 - 27332 (-)
Type: pfam
Location: 27075 - 27332 (-)
Gene ID: HRGMv2_3391_4_32
Type:
Location: 27326 - 27511 (-)
Type:
Location: 27326 - 27511 (-)
Gene ID: HRGMv2_3391_4_33
Type: TC
Location: 27593 - 28450 (+)
Type: TC
Location: 27593 - 28450 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-582
Species
CAG-582 sp900760845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.