Cluster: HRGMv2_3388_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3388
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3388_2 | HRGMv2_3388_2_2 | 1523 | 2530 | + | GH23 |
| pfam | HRGMv2_3388_2 | HRGMv2_3388_2_3 | 2848 | 3768 | + | TpcC |
| pfam | HRGMv2_3388_2 | HRGMv2_3388_2_4 | 3801 | 4937 | - | Amidase_6 |
| TC | HRGMv2_3388_2 | HRGMv2_3388_2_5 | 4949 | 5602 | - | 3.A.1.134.11 |
Gene ID: HRGMv2_3388_2_2
Type: CAZyme
Location: 1523 - 2530 (+)
Type: CAZyme
Location: 1523 - 2530 (+)
Gene ID: HRGMv2_3388_2_3
Type: pfam
Location: 2848 - 3768 (+)
Type: pfam
Location: 2848 - 3768 (+)
Gene ID: HRGMv2_3388_2_4
Type: pfam
Location: 3801 - 4937 (-)
Type: pfam
Location: 3801 - 4937 (-)
Gene ID: HRGMv2_3388_2_5
Type: TC
Location: 4949 - 5602 (-)
Type: TC
Location: 4949 - 5602 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-533
Species
CAG-533 sp900553855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.