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Cluster: HRGMv2_3388_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3388_1 HRGMv2_3388_1_378 359945 362104 + 3.A.7.16.1
NULL(UNKNOWN) HRGMv2_3388_1 HRGMv2_3388_1_379 362135 362278 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3388_1 HRGMv2_3388_1_380 362286 363641 - 3.A.15.3.1
pfam HRGMv2_3388_1 HRGMv2_3388_1_381 364018 366549 + tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g
CAZyme HRGMv2_3388_1 HRGMv2_3388_1_382 367242 368327 + GT28
TC HRGMv2_3388_1 HRGMv2_3388_1_383 368350 370074 + 4.C.1.1.7
pfam HRGMv2_3388_1 HRGMv2_3388_1_384 370175 371101 + Formyl_trans_N | Formyl_trans_C
NULL(UNKNOWN) HRGMv2_3388_1 HRGMv2_3388_1_385 371101 371664 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3388_1 HRGMv2_3388_1_386 371685 372920 + 2.A.86.1.8
Gene ID: HRGMv2_3388_1_378
Type: TC
Location: 359945 - 362104 (+)
Gene ID: HRGMv2_3388_1_379
Type:
Location: 362135 - 362278 (+)
Gene ID: HRGMv2_3388_1_380
Type: TC
Location: 362286 - 363641 (-)
Gene ID: HRGMv2_3388_1_381
Type: pfam
Location: 364018 - 366549 (+)
Gene ID: HRGMv2_3388_1_382
Type: CAZyme
Location: 367242 - 368327 (+)
Gene ID: HRGMv2_3388_1_383
Type: TC
Location: 368350 - 370074 (+)
Gene ID: HRGMv2_3388_1_384
Type: pfam
Location: 370175 - 371101 (+)
Gene ID: HRGMv2_3388_1_385
Type:
Location: 371101 - 371664 (+)
Gene ID: HRGMv2_3388_1_386
Type: TC
Location: 371685 - 372920 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
CAG-533
→
Species
CAG-533 sp900553855

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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