Cluster: HRGMv2_3387_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3387
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3387_3 | HRGMv2_3387_3_57 | 47085 | 47690 | + | 4.F.1.1.7 |
| pfam | HRGMv2_3387_3 | HRGMv2_3387_3_58 | 47843 | 48856 | + | RecA | Rad51 | RecA_C |
| CAZyme | HRGMv2_3387_3 | HRGMv2_3387_3_59 | 48881 | 50086 | - | GH25 |
Gene ID: HRGMv2_3387_3_57
Type: TC
Location: 47085 - 47690 (+)
Type: TC
Location: 47085 - 47690 (+)
Gene ID: HRGMv2_3387_3_58
Type: pfam
Location: 47843 - 48856 (+)
Type: pfam
Location: 47843 - 48856 (+)
Gene ID: HRGMv2_3387_3_59
Type: CAZyme
Location: 48881 - 50086 (-)
Type: CAZyme
Location: 48881 - 50086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1271
Species
UMGS1271 sp900550255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.