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Cluster: HRGMv2_3387_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_301 289280 290071 - GT2
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_302 290058 291059 - GT8
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_303 291074 292057 - GT2
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_304 292070 293062 - GT2
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_305 293055 294011 - GT11
pfam HRGMv2_3387_1 HRGMv2_3387_1_306 294001 295440 - Polysacc_synt | Polysacc_synt_3
pfam HRGMv2_3387_1 HRGMv2_3387_1_307 295427 295777 - DUF2304
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_308 295777 297903 - GT2
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_309 298012 299613 - GH25
pfam HRGMv2_3387_1 HRGMv2_3387_1_310 299774 300931 - PS_pyruv_trans
NULL(UNKNOWN) HRGMv2_3387_1 HRGMv2_3387_1_311 300936 301847 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_312 301837 303651 - GT32
TC HRGMv2_3387_1 HRGMv2_3387_1_313 303653 304426 - 3.A.1.103.4
TC HRGMv2_3387_1 HRGMv2_3387_1_314 304431 305171 - 3.A.1.103.4
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_315 305242 306177 - GT2
pfam HRGMv2_3387_1 HRGMv2_3387_1_316 306188 307234 - Acyl_transf_3
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_317 307240 308166 - GT2
CAZyme HRGMv2_3387_1 HRGMv2_3387_1_318 308166 310508 - GT4
Gene ID: HRGMv2_3387_1_301
Type: CAZyme
Location: 289280 - 290071 (-)
Gene ID: HRGMv2_3387_1_302
Type: CAZyme
Location: 290058 - 291059 (-)
Gene ID: HRGMv2_3387_1_303
Type: CAZyme
Location: 291074 - 292057 (-)
Gene ID: HRGMv2_3387_1_304
Type: CAZyme
Location: 292070 - 293062 (-)
Gene ID: HRGMv2_3387_1_305
Type: CAZyme
Location: 293055 - 294011 (-)
Gene ID: HRGMv2_3387_1_306
Type: pfam
Location: 294001 - 295440 (-)
Gene ID: HRGMv2_3387_1_307
Type: pfam
Location: 295427 - 295777 (-)
Gene ID: HRGMv2_3387_1_308
Type: CAZyme
Location: 295777 - 297903 (-)
Gene ID: HRGMv2_3387_1_309
Type: CAZyme
Location: 298012 - 299613 (-)
Gene ID: HRGMv2_3387_1_310
Type: pfam
Location: 299774 - 300931 (-)
Gene ID: HRGMv2_3387_1_311
Type:
Location: 300936 - 301847 (-)
Gene ID: HRGMv2_3387_1_312
Type: CAZyme
Location: 301837 - 303651 (-)
Gene ID: HRGMv2_3387_1_313
Type: TC
Location: 303653 - 304426 (-)
Gene ID: HRGMv2_3387_1_314
Type: TC
Location: 304431 - 305171 (-)
Gene ID: HRGMv2_3387_1_315
Type: CAZyme
Location: 305242 - 306177 (-)
Gene ID: HRGMv2_3387_1_316
Type: pfam
Location: 306188 - 307234 (-)
Gene ID: HRGMv2_3387_1_317
Type: CAZyme
Location: 307240 - 308166 (-)
Gene ID: HRGMv2_3387_1_318
Type: CAZyme
Location: 308166 - 310508 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
UMGS1271
→
Species
UMGS1271 sp900550255

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3387_1_308 vegetarian > omnivore 22.39198 0.01332
HRGMv2_3387_1_309 vegetarian > omnivore 20.37051 0.01332

🧭 Explore Read Mapping of CGC

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