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Cluster: HRGMv2_3384_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3384_8 HRGMv2_3384_8_4 2354 3604 + 3.D.6.1.4
TC HRGMv2_3384_8 HRGMv2_3384_8_5 3601 5034 + 3.D.6.1.2
TC HRGMv2_3384_8 HRGMv2_3384_8_6 5110 5739 + 3.D.6.1.2
TC HRGMv2_3384_8 HRGMv2_3384_8_7 5732 6289 + 3.D.6.1.2
STP HRGMv2_3384_8 HRGMv2_3384_8_8 6401 6652 + FeS
NULL(UNKNOWN) HRGMv2_3384_8 HRGMv2_3384_8_9 6908 7231 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3384_8 HRGMv2_3384_8_10 7368 8285 + GT2
NULL(UNKNOWN) HRGMv2_3384_8 HRGMv2_3384_8_11 8309 9937 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3384_8 HRGMv2_3384_8_12 10626 12263 + MatE | Polysacc_synt
CAZyme HRGMv2_3384_8 HRGMv2_3384_8_13 12265 13407 + GT4
Gene ID: HRGMv2_3384_8_4
Type: TC
Location: 2354 - 3604 (+)
Gene ID: HRGMv2_3384_8_5
Type: TC
Location: 3601 - 5034 (+)
Gene ID: HRGMv2_3384_8_6
Type: TC
Location: 5110 - 5739 (+)
Gene ID: HRGMv2_3384_8_7
Type: TC
Location: 5732 - 6289 (+)
Gene ID: HRGMv2_3384_8_8
Type: STP
Location: 6401 - 6652 (+)
Gene ID: HRGMv2_3384_8_9
Type:
Location: 6908 - 7231 (-)
Gene ID: HRGMv2_3384_8_10
Type: CAZyme
Location: 7368 - 8285 (+)
Gene ID: HRGMv2_3384_8_11
Type:
Location: 8309 - 9937 (-)
Gene ID: HRGMv2_3384_8_12
Type: pfam
Location: 10626 - 12263 (+)
Gene ID: HRGMv2_3384_8_13
Type: CAZyme
Location: 12265 - 13407 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
CAG-1193
→
Species
CAG-1193 sp000436255

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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