Cluster: HRGMv2_3374_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3374
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3374_4 | HRGMv2_3374_4_57 | 56809 | 58713 | - | GT4 |
| TC | HRGMv2_3374_4 | HRGMv2_3374_4_58 | 58715 | 59488 | - | 3.A.1.103.1 |
| pfam | HRGMv2_3374_4 | HRGMv2_3374_4_59 | 59499 | 60287 | - | ABC2_membrane |
| CAZyme | HRGMv2_3374_4 | HRGMv2_3374_4_60 | 60292 | 62451 | - | GT26 |
| NULL(UNKNOWN) | HRGMv2_3374_4 | HRGMv2_3374_4_61 | 62467 | 63006 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3374_4 | HRGMv2_3374_4_62 | 63395 | 65194 | + | SIS | SIS |
| TC | HRGMv2_3374_4 | HRGMv2_3374_4_63 | 65244 | 66293 | - | 9.B.146.1.1 |
| pfam | HRGMv2_3374_4 | HRGMv2_3374_4_64 | 66349 | 67071 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| NULL(UNKNOWN) | HRGMv2_3374_4 | HRGMv2_3374_4_65 | 67071 | 67682 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3374_4 | HRGMv2_3374_4_66 | 67673 | 68419 | - | 3.A.1.6.9 |
| TC | HRGMv2_3374_4 | HRGMv2_3374_4_67 | 68503 | 69699 | - | 9.B.174.1.1 |
Gene ID: HRGMv2_3374_4_57
Type: CAZyme
Location: 56809 - 58713 (-)
Type: CAZyme
Location: 56809 - 58713 (-)
Gene ID: HRGMv2_3374_4_58
Type: TC
Location: 58715 - 59488 (-)
Type: TC
Location: 58715 - 59488 (-)
Gene ID: HRGMv2_3374_4_59
Type: pfam
Location: 59499 - 60287 (-)
Type: pfam
Location: 59499 - 60287 (-)
Gene ID: HRGMv2_3374_4_60
Type: CAZyme
Location: 60292 - 62451 (-)
Type: CAZyme
Location: 60292 - 62451 (-)
Gene ID: HRGMv2_3374_4_61
Type:
Location: 62467 - 63006 (-)
Type:
Location: 62467 - 63006 (-)
Gene ID: HRGMv2_3374_4_62
Type: STP
Location: 63395 - 65194 (+)
Type: STP
Location: 63395 - 65194 (+)
Gene ID: HRGMv2_3374_4_63
Type: TC
Location: 65244 - 66293 (-)
Type: TC
Location: 65244 - 66293 (-)
Gene ID: HRGMv2_3374_4_64
Type: pfam
Location: 66349 - 67071 (-)
Type: pfam
Location: 66349 - 67071 (-)
Gene ID: HRGMv2_3374_4_65
Type:
Location: 67071 - 67682 (-)
Type:
Location: 67071 - 67682 (-)
Gene ID: HRGMv2_3374_4_66
Type: TC
Location: 67673 - 68419 (-)
Type: TC
Location: 67673 - 68419 (-)
Gene ID: HRGMv2_3374_4_67
Type: TC
Location: 68503 - 69699 (-)
Type: TC
Location: 68503 - 69699 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-533
Species
CAG-533 sp000434495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.