Cluster: HRGMv2_3374_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3374
- CGC Family ID: CGCFAM_10366
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3374_1 | HRGMv2_3374_1_131 | 123009 | 123983 | - | 3.A.5.1.1 |
| pfam | HRGMv2_3374_1 | HRGMv2_3374_1_132 | 123988 | 124989 | - | QueH | N_methyl |
| pfam | HRGMv2_3374_1 | HRGMv2_3374_1_133 | 124992 | 125705 | - | POTRA_1 |
| CAZyme | HRGMv2_3374_1 | HRGMv2_3374_1_134 | 125717 | 126790 | - | GT28 |
| pfam | HRGMv2_3374_1 | HRGMv2_3374_1_135 | 126832 | 127590 | - | RrnaAD |
| STP | HRGMv2_3374_1 | HRGMv2_3374_1_136 | 127580 | 128905 | - | TPR_1 |
| TC | HRGMv2_3374_1 | HRGMv2_3374_1_137 | 129035 | 130267 | + | 2.A.23.1.5 |
Gene ID: HRGMv2_3374_1_131
Type: TC
Location: 123009 - 123983 (-)
Type: TC
Location: 123009 - 123983 (-)
Gene ID: HRGMv2_3374_1_132
Type: pfam
Location: 123988 - 124989 (-)
Type: pfam
Location: 123988 - 124989 (-)
Gene ID: HRGMv2_3374_1_133
Type: pfam
Location: 124992 - 125705 (-)
Type: pfam
Location: 124992 - 125705 (-)
Gene ID: HRGMv2_3374_1_134
Type: CAZyme
Location: 125717 - 126790 (-)
Type: CAZyme
Location: 125717 - 126790 (-)
Gene ID: HRGMv2_3374_1_135
Type: pfam
Location: 126832 - 127590 (-)
Type: pfam
Location: 126832 - 127590 (-)
Gene ID: HRGMv2_3374_1_136
Type: STP
Location: 127580 - 128905 (-)
Type: STP
Location: 127580 - 128905 (-)
Gene ID: HRGMv2_3374_1_137
Type: TC
Location: 129035 - 130267 (+)
Type: TC
Location: 129035 - 130267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-533
Species
CAG-533 sp000434495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.