Cluster: HRGMv2_3369_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3369
- CGC Family ID: CGCFAM_00018
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3369_62 | HRGMv2_3369_62_1 | 2 | 1513 | - | GT4 |
| pfam | HRGMv2_3369_62 | HRGMv2_3369_62_2 | 1544 | 2653 | - | Epimerase_2 |
| pfam | HRGMv2_3369_62 | HRGMv2_3369_62_3 | 2655 | 3500 | - | Epimerase | RmlD_sub_bind |
| TC | HRGMv2_3369_62 | HRGMv2_3369_62_4 | 3502 | 4512 | - | 9.B.18.2.1 |
| TC | HRGMv2_3369_62 | HRGMv2_3369_62_5 | 4527 | 5264 | - | 3.A.1.103.5 |
Gene ID: HRGMv2_3369_62_1
Type: CAZyme
Location: 2 - 1513 (-)
Type: CAZyme
Location: 2 - 1513 (-)
Gene ID: HRGMv2_3369_62_2
Type: pfam
Location: 1544 - 2653 (-)
Type: pfam
Location: 1544 - 2653 (-)
Gene ID: HRGMv2_3369_62_3
Type: pfam
Location: 2655 - 3500 (-)
Type: pfam
Location: 2655 - 3500 (-)
Gene ID: HRGMv2_3369_62_4
Type: TC
Location: 3502 - 4512 (-)
Type: TC
Location: 3502 - 4512 (-)
Gene ID: HRGMv2_3369_62_5
Type: TC
Location: 4527 - 5264 (-)
Type: TC
Location: 4527 - 5264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-877
Species
CAG-877 sp900768815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.