Cluster: HRGMv2_3368_CGC5
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3368
- CGC Family ID: CGCFAM_02729
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_28 | 27901 | 29865 | - | GH25 |
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_29 | 29889 | 32204 | - | GT2 | GT4 |
| STP | HRGMv2_3368_4 | HRGMv2_3368_4_30 | 32206 | 34659 | - | Fer4 |
| TC | HRGMv2_3368_4 | HRGMv2_3368_4_31 | 34753 | 35697 | - | 3.A.12.1.3 |
| TC | HRGMv2_3368_4 | HRGMv2_3368_4_32 | 35775 | 36557 | - | 3.A.1.103.4 |
| TC | HRGMv2_3368_4 | HRGMv2_3368_4_33 | 36554 | 37297 | - | 3.A.1.103.4 |
| pfam | HRGMv2_3368_4 | HRGMv2_3368_4_34 | 37355 | 38473 | - | Acyl_transf_3 |
| pfam | HRGMv2_3368_4 | HRGMv2_3368_4_35 | 38605 | 39852 | - | DUF6056 |
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_36 | 39935 | 40879 | - | GT2 |
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_37 | 40872 | 41822 | - | GT2 |
| TC | HRGMv2_3368_4 | HRGMv2_3368_4_38 | 41961 | 43484 | - | 3.A.7.19.1 |
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_39 | 43491 | 44408 | - | GT2 |
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_40 | 44531 | 45190 | - | CE3 |
| pfam | HRGMv2_3368_4 | HRGMv2_3368_4_41 | 45481 | 47958 | - | YfhO | YfhO |
| pfam | HRGMv2_3368_4 | HRGMv2_3368_4_42 | 48292 | 49440 | - | Acyl_transf_3 |
| CAZyme | HRGMv2_3368_4 | HRGMv2_3368_4_43 | 49543 | 51846 | - | GT4 |
Gene ID: HRGMv2_3368_4_28
Type: CAZyme
Location: 27901 - 29865 (-)
Type: CAZyme
Location: 27901 - 29865 (-)
Gene ID: HRGMv2_3368_4_29
Type: CAZyme
Location: 29889 - 32204 (-)
Type: CAZyme
Location: 29889 - 32204 (-)
Gene ID: HRGMv2_3368_4_30
Type: STP
Location: 32206 - 34659 (-)
Type: STP
Location: 32206 - 34659 (-)
Gene ID: HRGMv2_3368_4_31
Type: TC
Location: 34753 - 35697 (-)
Type: TC
Location: 34753 - 35697 (-)
Gene ID: HRGMv2_3368_4_32
Type: TC
Location: 35775 - 36557 (-)
Type: TC
Location: 35775 - 36557 (-)
Gene ID: HRGMv2_3368_4_33
Type: TC
Location: 36554 - 37297 (-)
Type: TC
Location: 36554 - 37297 (-)
Gene ID: HRGMv2_3368_4_34
Type: pfam
Location: 37355 - 38473 (-)
Type: pfam
Location: 37355 - 38473 (-)
Gene ID: HRGMv2_3368_4_35
Type: pfam
Location: 38605 - 39852 (-)
Type: pfam
Location: 38605 - 39852 (-)
Gene ID: HRGMv2_3368_4_36
Type: CAZyme
Location: 39935 - 40879 (-)
Type: CAZyme
Location: 39935 - 40879 (-)
Gene ID: HRGMv2_3368_4_37
Type: CAZyme
Location: 40872 - 41822 (-)
Type: CAZyme
Location: 40872 - 41822 (-)
Gene ID: HRGMv2_3368_4_38
Type: TC
Location: 41961 - 43484 (-)
Type: TC
Location: 41961 - 43484 (-)
Gene ID: HRGMv2_3368_4_39
Type: CAZyme
Location: 43491 - 44408 (-)
Type: CAZyme
Location: 43491 - 44408 (-)
Gene ID: HRGMv2_3368_4_40
Type: CAZyme
Location: 44531 - 45190 (-)
Type: CAZyme
Location: 44531 - 45190 (-)
Gene ID: HRGMv2_3368_4_41
Type: pfam
Location: 45481 - 47958 (-)
Type: pfam
Location: 45481 - 47958 (-)
Gene ID: HRGMv2_3368_4_42
Type: pfam
Location: 48292 - 49440 (-)
Type: pfam
Location: 48292 - 49440 (-)
Gene ID: HRGMv2_3368_4_43
Type: CAZyme
Location: 49543 - 51846 (-)
Type: CAZyme
Location: 49543 - 51846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UBA3789
Species
UBA3789 sp934131175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.