Cluster: HRGMv2_3365_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3365
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3365_16 | HRGMv2_3365_16_2 | 147 | 836 | + | GT51 |
| TF | HRGMv2_3365_16 | HRGMv2_3365_16_3 | 928 | 1590 | + | Trans_reg_C |
| STP | HRGMv2_3365_16 | HRGMv2_3365_16_4 | 1587 | 2603 | + | HATPase_c |
| TC | HRGMv2_3365_16 | HRGMv2_3365_16_5 | 2722 | 3489 | + | 3.A.1.134.12 |
| TC | HRGMv2_3365_16 | HRGMv2_3365_16_6 | 3479 | 4051 | + | 3.A.1.134.2 |
Gene ID: HRGMv2_3365_16_2
Type: CAZyme
Location: 147 - 836 (+)
Type: CAZyme
Location: 147 - 836 (+)
Gene ID: HRGMv2_3365_16_3
Type: TF
Location: 928 - 1590 (+)
Type: TF
Location: 928 - 1590 (+)
Gene ID: HRGMv2_3365_16_4
Type: STP
Location: 1587 - 2603 (+)
Type: STP
Location: 1587 - 2603 (+)
Gene ID: HRGMv2_3365_16_5
Type: TC
Location: 2722 - 3489 (+)
Type: TC
Location: 2722 - 3489 (+)
Gene ID: HRGMv2_3365_16_6
Type: TC
Location: 3479 - 4051 (+)
Type: TC
Location: 3479 - 4051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-1193
Species
CAG-1193 sp900550145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.