Cluster: HRGMv2_3362_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3362
- CGC Family ID: CGCFAM_00532
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3362_4 | HRGMv2_3362_4_3 | 2150 | 3049 | + | 3.A.1.124.3 |
| pfam | HRGMv2_3362_4 | HRGMv2_3362_4_4 | 3033 | 4388 | + | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4 |
| CAZyme | HRGMv2_3362_4 | HRGMv2_3362_4_5 | 4400 | 5548 | + | CE4 |
Gene ID: HRGMv2_3362_4_3
Type: TC
Location: 2150 - 3049 (+)
Type: TC
Location: 2150 - 3049 (+)
Gene ID: HRGMv2_3362_4_4
Type: pfam
Location: 3033 - 4388 (+)
Type: pfam
Location: 3033 - 4388 (+)
Gene ID: HRGMv2_3362_4_5
Type: CAZyme
Location: 4400 - 5548 (+)
Type: CAZyme
Location: 4400 - 5548 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Onthocola_B
Species
Onthocola_B sp000438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.