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Cluster: HRGMv2_3362_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3362_1 HRGMv2_3362_1_18 19950 20705 + 3.A.1.103.1
NULL(UNKNOWN) HRGMv2_3362_1 HRGMv2_3362_1_19 20713 21852 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3362_1 HRGMv2_3362_1_20 21852 23072 + GT4
CAZyme HRGMv2_3362_1 HRGMv2_3362_1_21 23089 24921 + GT4
pfam HRGMv2_3362_1 HRGMv2_3362_1_22 24930 26207 + Glyco_transf_4 | Glyco_trans_4_2
pfam HRGMv2_3362_1 HRGMv2_3362_1_23 26200 27309 + Epimerase_2
CAZyme HRGMv2_3362_1 HRGMv2_3362_1_24 27422 29389 + GT2
CAZyme HRGMv2_3362_1 HRGMv2_3362_1_25 29397 30665 + GT4
CAZyme HRGMv2_3362_1 HRGMv2_3362_1_26 30668 31378 + GT26
Gene ID: HRGMv2_3362_1_18
Type: TC
Location: 19950 - 20705 (+)
Gene ID: HRGMv2_3362_1_19
Type:
Location: 20713 - 21852 (+)
Gene ID: HRGMv2_3362_1_20
Type: CAZyme
Location: 21852 - 23072 (+)
Gene ID: HRGMv2_3362_1_21
Type: CAZyme
Location: 23089 - 24921 (+)
Gene ID: HRGMv2_3362_1_22
Type: pfam
Location: 24930 - 26207 (+)
Gene ID: HRGMv2_3362_1_23
Type: pfam
Location: 26200 - 27309 (+)
Gene ID: HRGMv2_3362_1_24
Type: CAZyme
Location: 27422 - 29389 (+)
Gene ID: HRGMv2_3362_1_25
Type: CAZyme
Location: 29397 - 30665 (+)
Gene ID: HRGMv2_3362_1_26
Type: CAZyme
Location: 30668 - 31378 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Onthocola_B
→
Species
Onthocola_B sp000438075

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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