Cluster: HRGMv2_3357_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3357
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3357_11 | HRGMv2_3357_11_1 | 3 | 875 | - | 3.A.1.134.2 |
| TC | HRGMv2_3357_11 | HRGMv2_3357_11_2 | 865 | 1632 | - | 3.A.1.134.12 |
| STP | HRGMv2_3357_11 | HRGMv2_3357_11_3 | 1751 | 2767 | - | HATPase_c |
| TF | HRGMv2_3357_11 | HRGMv2_3357_11_4 | 2764 | 3426 | - | Trans_reg_C |
| CAZyme | HRGMv2_3357_11 | HRGMv2_3357_11_5 | 3519 | 4019 | - | GT51 |
Gene ID: HRGMv2_3357_11_1
Type: TC
Location: 3 - 875 (-)
Type: TC
Location: 3 - 875 (-)
Gene ID: HRGMv2_3357_11_2
Type: TC
Location: 865 - 1632 (-)
Type: TC
Location: 865 - 1632 (-)
Gene ID: HRGMv2_3357_11_3
Type: STP
Location: 1751 - 2767 (-)
Type: STP
Location: 1751 - 2767 (-)
Gene ID: HRGMv2_3357_11_4
Type: TF
Location: 2764 - 3426 (-)
Type: TF
Location: 2764 - 3426 (-)
Gene ID: HRGMv2_3357_11_5
Type: CAZyme
Location: 3519 - 4019 (-)
Type: CAZyme
Location: 3519 - 4019 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-611
Species
CAG-611 sp000434175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3357_11_1 | vegan > vegetarian | 1.52507 | 0.01761 |
| HRGMv2_3357_11_2 | vegan > vegetarian | 1.14947 | 0.03529 |
| HRGMv2_3357_11_5 | vegan > vegetarian | 1.31529 | 0.03529 |