Cluster: HRGMv2_3356_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3356
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3356_7 | HRGMv2_3356_7_33 | 34063 | 35616 | + | 2.A.66.1.40 |
| CAZyme | HRGMv2_3356_7 | HRGMv2_3356_7_34 | 35609 | 36511 | + | GT14 |
| CAZyme | HRGMv2_3356_7 | HRGMv2_3356_7_35 | 36504 | 37469 | + | GT2 |
| pfam | HRGMv2_3356_7 | HRGMv2_3356_7_36 | 37456 | 38940 | + | O-antigen_lig |
| CAZyme | HRGMv2_3356_7 | HRGMv2_3356_7_37 | 39079 | 40038 | + | GT2 |
| CAZyme | HRGMv2_3356_7 | HRGMv2_3356_7_38 | 40039 | 41013 | + | GT2 |
| CAZyme | HRGMv2_3356_7 | HRGMv2_3356_7_39 | 41010 | 42161 | + | GT4 |
Gene ID: HRGMv2_3356_7_33
Type: TC
Location: 34063 - 35616 (+)
Type: TC
Location: 34063 - 35616 (+)
Gene ID: HRGMv2_3356_7_34
Type: CAZyme
Location: 35609 - 36511 (+)
Type: CAZyme
Location: 35609 - 36511 (+)
Gene ID: HRGMv2_3356_7_35
Type: CAZyme
Location: 36504 - 37469 (+)
Type: CAZyme
Location: 36504 - 37469 (+)
Gene ID: HRGMv2_3356_7_36
Type: pfam
Location: 37456 - 38940 (+)
Type: pfam
Location: 37456 - 38940 (+)
Gene ID: HRGMv2_3356_7_37
Type: CAZyme
Location: 39079 - 40038 (+)
Type: CAZyme
Location: 39079 - 40038 (+)
Gene ID: HRGMv2_3356_7_38
Type: CAZyme
Location: 40039 - 41013 (+)
Type: CAZyme
Location: 40039 - 41013 (+)
Gene ID: HRGMv2_3356_7_39
Type: CAZyme
Location: 41010 - 42161 (+)
Type: CAZyme
Location: 41010 - 42161 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-914
Species
CAG-914 sp000437895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.