Cluster: HRGMv2_3356_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3356
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3356_3 | HRGMv2_3356_3_81 | 75954 | 77921 | + | GT51 |
| TF | HRGMv2_3356_3 | HRGMv2_3356_3_82 | 77933 | 79267 | - | HTH_3 |
| pfam | HRGMv2_3356_3 | HRGMv2_3356_3_83 | 79400 | 80101 | - | GidB | Methyltransf_31 |
| TC | HRGMv2_3356_3 | HRGMv2_3356_3_84 | 80094 | 81971 | - | 1.C.39.4.5 |
| pfam | HRGMv2_3356_3 | HRGMv2_3356_3_85 | 81980 | 83320 | - | MMR_HSR1 | FeoB_N | AIG1 | TrmE_N | MnmE_helical |
| pfam | HRGMv2_3356_3 | HRGMv2_3356_3_86 | 83405 | 84016 | - | R3H | KH_2 | KH_KhpA-B |
| TC | HRGMv2_3356_3 | HRGMv2_3356_3_87 | 84016 | 84927 | - | 2.A.9.3.6 |
Gene ID: HRGMv2_3356_3_81
Type: CAZyme
Location: 75954 - 77921 (+)
Type: CAZyme
Location: 75954 - 77921 (+)
Gene ID: HRGMv2_3356_3_82
Type: TF
Location: 77933 - 79267 (-)
Type: TF
Location: 77933 - 79267 (-)
Gene ID: HRGMv2_3356_3_83
Type: pfam
Location: 79400 - 80101 (-)
Type: pfam
Location: 79400 - 80101 (-)
Gene ID: HRGMv2_3356_3_84
Type: TC
Location: 80094 - 81971 (-)
Type: TC
Location: 80094 - 81971 (-)
Gene ID: HRGMv2_3356_3_85
Type: pfam
Location: 81980 - 83320 (-)
Type: pfam
Location: 81980 - 83320 (-)
Gene ID: HRGMv2_3356_3_86
Type: pfam
Location: 83405 - 84016 (-)
Type: pfam
Location: 83405 - 84016 (-)
Gene ID: HRGMv2_3356_3_87
Type: TC
Location: 84016 - 84927 (-)
Type: TC
Location: 84016 - 84927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-914
Species
CAG-914 sp000437895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.