Cluster: HRGMv2_3340_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3340
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3340_77 | HRGMv2_3340_77_5 | 2562 | 4475 | + | 1.A.33.1.2 |
| sulfatase | HRGMv2_3340_77 | HRGMv2_3340_77_6 | 4544 | 5746 | + | S1_7 |
| CAZyme | HRGMv2_3340_77 | HRGMv2_3340_77_7 | 5743 | 6318 | + | AA6 |
Gene ID: HRGMv2_3340_77_5
Type: TC
Location: 2562 - 4475 (+)
Type: TC
Location: 2562 - 4475 (+)
Gene ID: HRGMv2_3340_77_6
Type: sulfatase
Location: 4544 - 5746 (+)
Type: sulfatase
Location: 4544 - 5746 (+)
Gene ID: HRGMv2_3340_77_7
Type: CAZyme
Location: 5743 - 6318 (+)
Type: CAZyme
Location: 5743 - 6318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.