Cluster: HRGMv2_3340_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3340
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3340_7 | HRGMv2_3340_7_1 | 2 | 658 | + | 1.A.30.1.1 |
| TC | HRGMv2_3340_7 | HRGMv2_3340_7_2 | 674 | 1588 | + | 1.A.30.1.1 |
| pfam | HRGMv2_3340_7 | HRGMv2_3340_7_3 | 1662 | 2402 | + | DUF374 |
| CAZyme | HRGMv2_3340_7 | HRGMv2_3340_7_4 | 2402 | 3718 | + | GT30 |
Gene ID: HRGMv2_3340_7_1
Type: TC
Location: 2 - 658 (+)
Type: TC
Location: 2 - 658 (+)
Gene ID: HRGMv2_3340_7_2
Type: TC
Location: 674 - 1588 (+)
Type: TC
Location: 674 - 1588 (+)
Gene ID: HRGMv2_3340_7_3
Type: pfam
Location: 1662 - 2402 (+)
Type: pfam
Location: 1662 - 2402 (+)
Gene ID: HRGMv2_3340_7_4
Type: CAZyme
Location: 2402 - 3718 (+)
Type: CAZyme
Location: 2402 - 3718 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.