Cluster: HRGMv2_3339_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3339_19 | HRGMv2_3339_19_13 | 17470 | 18558 | - | GT28 |
| TC | HRGMv2_3339_19 | HRGMv2_3339_19_14 | 18555 | 19628 | - | 2.A.103.1.1 |
| TC | HRGMv2_3339_19 | HRGMv2_3339_19_15 | 19686 | 20774 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3339_19_13
Type: CAZyme
Location: 17470 - 18558 (-)
Type: CAZyme
Location: 17470 - 18558 (-)
Gene ID: HRGMv2_3339_19_14
Type: TC
Location: 18555 - 19628 (-)
Type: TC
Location: 18555 - 19628 (-)
Gene ID: HRGMv2_3339_19_15
Type: TC
Location: 19686 - 20774 (-)
Type: TC
Location: 19686 - 20774 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.