Cluster: HRGMv2_3339_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- CGC Family ID: CGCFAM_10361
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3339_18 | HRGMv2_3339_18_18 | 19299 | 20462 | + | GH102 |
| NULL(UNKNOWN) | HRGMv2_3339_18 | HRGMv2_3339_18_19 | 20459 | 20932 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3339_18 | HRGMv2_3339_18_20 | 20929 | 21471 | + | Smr |
| TC | HRGMv2_3339_18 | HRGMv2_3339_18_21 | 21478 | 21750 | - | 2.A.106.3.1 |
Gene ID: HRGMv2_3339_18_18
Type: CAZyme
Location: 19299 - 20462 (+)
Type: CAZyme
Location: 19299 - 20462 (+)
Gene ID: HRGMv2_3339_18_19
Type:
Location: 20459 - 20932 (+)
Type:
Location: 20459 - 20932 (+)
Gene ID: HRGMv2_3339_18_20
Type: pfam
Location: 20929 - 21471 (+)
Type: pfam
Location: 20929 - 21471 (+)
Gene ID: HRGMv2_3339_18_21
Type: TC
Location: 21478 - 21750 (-)
Type: TC
Location: 21478 - 21750 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.