Cluster: HRGMv2_3339_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3339_16 | HRGMv2_3339_16_18 | 16179 | 17120 | - | GT2 |
| TC | HRGMv2_3339_16 | HRGMv2_3339_16_19 | 17142 | 17660 | - | 2.A.51.1.6 |
| TC | HRGMv2_3339_16 | HRGMv2_3339_16_20 | 17657 | 18193 | - | 2.A.51.1.6 |
Gene ID: HRGMv2_3339_16_18
Type: CAZyme
Location: 16179 - 17120 (-)
Type: CAZyme
Location: 16179 - 17120 (-)
Gene ID: HRGMv2_3339_16_19
Type: TC
Location: 17142 - 17660 (-)
Type: TC
Location: 17142 - 17660 (-)
Gene ID: HRGMv2_3339_16_20
Type: TC
Location: 17657 - 18193 (-)
Type: TC
Location: 17657 - 18193 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.