Cluster: HRGMv2_3339_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- CGC Family ID: CGCFAM_10360
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3339_10 | HRGMv2_3339_10_41 | 42810 | 44030 | + | GT5 |
| pfam | HRGMv2_3339_10 | HRGMv2_3339_10_42 | 44110 | 45087 | - | DUF4340 |
| TC | HRGMv2_3339_10 | HRGMv2_3339_10_43 | 45084 | 47537 | - | 3.A.1.132.3 |
| TC | HRGMv2_3339_10 | HRGMv2_3339_10_44 | 47534 | 48487 | - | 3.A.1.132.4 |
Gene ID: HRGMv2_3339_10_41
Type: CAZyme
Location: 42810 - 44030 (+)
Type: CAZyme
Location: 42810 - 44030 (+)
Gene ID: HRGMv2_3339_10_42
Type: pfam
Location: 44110 - 45087 (-)
Type: pfam
Location: 44110 - 45087 (-)
Gene ID: HRGMv2_3339_10_43
Type: TC
Location: 45084 - 47537 (-)
Type: TC
Location: 45084 - 47537 (-)
Gene ID: HRGMv2_3339_10_44
Type: TC
Location: 47534 - 48487 (-)
Type: TC
Location: 47534 - 48487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.