Cluster: HRGMv2_3339_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- CGC Family ID: CGCFAM_03871
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3339_9 | HRGMv2_3339_9_30 | 38610 | 39476 | + | 1.A.30.1.1 |
| TC | HRGMv2_3339_9 | HRGMv2_3339_9_31 | 39492 | 40409 | + | 1.A.30.1.1 |
| pfam | HRGMv2_3339_9 | HRGMv2_3339_9_32 | 40486 | 41226 | + | DUF374 |
| CAZyme | HRGMv2_3339_9 | HRGMv2_3339_9_33 | 41226 | 42545 | + | GT30 |
Gene ID: HRGMv2_3339_9_30
Type: TC
Location: 38610 - 39476 (+)
Type: TC
Location: 38610 - 39476 (+)
Gene ID: HRGMv2_3339_9_31
Type: TC
Location: 39492 - 40409 (+)
Type: TC
Location: 39492 - 40409 (+)
Gene ID: HRGMv2_3339_9_32
Type: pfam
Location: 40486 - 41226 (+)
Type: pfam
Location: 40486 - 41226 (+)
Gene ID: HRGMv2_3339_9_33
Type: CAZyme
Location: 41226 - 42545 (+)
Type: CAZyme
Location: 41226 - 42545 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.