Cluster: HRGMv2_3339_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3339_25 | HRGMv2_3339_25_2 | 188 | 1192 | + | GT8 |
| pfam | HRGMv2_3339_25 | HRGMv2_3339_25_3 | 1225 | 1773 | - | Ank | Ank | Ank_2 | Ank_2 | Ank_2 |
| pfam | HRGMv2_3339_25 | HRGMv2_3339_25_4 | 1920 | 3536 | + | Sulfatase |
| TC | HRGMv2_3339_25 | HRGMv2_3339_25_5 | 3537 | 4190 | - | 9.B.150.1.3 |
Gene ID: HRGMv2_3339_25_2
Type: CAZyme
Location: 188 - 1192 (+)
Type: CAZyme
Location: 188 - 1192 (+)
Gene ID: HRGMv2_3339_25_3
Type: pfam
Location: 1225 - 1773 (-)
Type: pfam
Location: 1225 - 1773 (-)
Gene ID: HRGMv2_3339_25_4
Type: pfam
Location: 1920 - 3536 (+)
Type: pfam
Location: 1920 - 3536 (+)
Gene ID: HRGMv2_3339_25_5
Type: TC
Location: 3537 - 4190 (-)
Type: TC
Location: 3537 - 4190 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.